

Molecular Docking and Computational Studies Investigation on a Bioactive Anti-cancer Drug: Thiazole Derivatives
In the present work, the 1-Benzyl-3-[2-(3-(4-chlorophenyl)-5-[4-(propan-2-yl)phenyl]-4,5-dihydro-1H-pyrazol-1-yl)-4-oxo-4,5-dihydro-1,3-thiazol-5(4H)-ylidene]-2,3-dihydro-1H-indol-2-one (BCPOT) anticancer candidates to treatment of breast cancer based on B3LYP level 6-31G(d,p) and LanL2DZ basis sets calculations and molecular docking. BCPOT have been proposed as potential stabilization energies, and topological properties have been evaluated as a function of acceptors and donor groups present in their structures. Detailed interpretation of the vibrational spectral assignments has been carried out using the Potential energy distribution (PED) analysis. The evaluation of the Fukui functions has also been carried out to describe the activity of the sites in the title compound. The non-covalent interaction (NCI) of the molecule has been explained by a reduced density gradient. Molecular electrostatic potential explains the nucleophilic and electrophilic reaction of the molecule. Molecular orbital interaction has been explained by Frontier molecular orbitals. For a better prediction of the anticancer properties of the proposed compound, molecular docking calculations are performed by using four structures of breast cancer activity. Docking results have been discussed based on binding affinities and the interaction types among ligands and different amino acid residues, indicating the powerful ability of ligands in front of the novel cancer disease.
Keywords
Thiazole, Anticancer, Molecular docking, Computational studies
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- Davide Romani & Silvia Antonia Brand, Int J Soc Res Methodol, 8 (2017) 66.
- Ladetto María F, Arquez María J M, Romani Davide & Brand Silvia A, J Adv Chem, 16 (2019) 6325.
- VijiA, Balachandran V, Babiyana S & Narayana B, J Mol Struc, 1203 (2020) 127452.
- VijiA, Balachandran V, Babiyana S, Narayana B & Salian Vinutha V, J Mol Struc, 1215 (2020) 128244.
- Salian Vinutha V, Narayana Badiadka, Sarojini Balladka K, Kumar Madan S, Nagananda Govinahalli S, Byrappa Kullaiah & Kudva Avinash K, Spectrochim Acta, 174 (2017) 254.
- Frisch M J, Trucks G W, Schkegel H B, Scuseria G C, Robb M A, Cheeseman J R, Scalmani G, Barone V, Mennucci B, Bloino G A, Zheng G, Sonnenberg J L, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Vreven T, Montgomery J A, Peralta J E, Ogliaro F, Bearpark M, Heyd J J, Brothers E, Kudin K N, Staroverov V N, Keith T, Kobayashi R, Normand J, Rghavachri K, Rendell A, Burant J C, Iyengar S S, Tomasi J, Cossi M, Rega N, Millam J M, Klene M, Knox J E, Cross J B, Bakken V, Adamo C, Jaramillo J, Gomperts R, Stratmann R E, Yazyev O, Austin A J, Cammi R, Pomelli C, Ochterski J W, Martin R L, Morokuma K, Zakrzewski V G, Voth G A, Salvador P, Dannenberg J J,.Dapprich S, Daniels A D, Farkas O, Foresman J B, Ortiz J V, Cioslowski J, Fox D J, Gaussian Inc, Wallingford CT, Gaussian 09, Revision D.01, (2013).
- Varghese H T, Panicker C Y & Philip D, J Raman Spect, 38 (2007) 309.
- Lu T & Chen F, J Comput Chem, 33 (2012) 580.
- Morris G M, Huey R, Lindstrom W, Sanner M F, Belew R K, Goodsell D S & Olson A J, J Comput Chem, 30 (2009) 2785.
- Sheena Mary Y, Tresa Varghese Hema, Panicker C Y, Thiemann T, Al Saadi Saheeed Abdulaziz, Popoola A, Van Alsenoy C & Al Jasem Yosef, Spectrochim Acta A, 150 (2015) 533.
- Erdogu Y, Tahir Gulluoolu M & Yurdakul S, J Mol Struct, 889 (2008) 361.
- Ditchfield R, J Chem Phys, 56 (1972) 5688.
- Hernandez O, Knight K S, Van Beek W, Boucekkine A, Boudjada A, Paulus W & Meinnel J, J Mol Struct, 791 (2006) 41.
- Fatma S, Bishnoi A, Singh V, Al-Omary F A M, El-Emam A A, Pathak S, Srivastava R, Prasad O & Sinha L, J Mol Struct, 1110 (2016) 128.
- Smith B, Infrared spectral interpretation, CRC Press, Boca Raton, (1999).
- Durig J R, Little T S, Gounev T K, Gardner J K & Sullivan J F, J Mol Struct, 375 (1996) 83.
- Kundoo S, Banarjee A N, Saha P & Chattopadhyaya K K, Mater Lett, 57 (2003) 2193.
- Wattanathana W, Nootsuwan N, Veranitisagul C, Koonsaeng N, Suramitr S, Laobuthee A, Murugavel S, Sundaramoorthy S, Lakshmanan D, Subahashini R & Pavan Kumar P, J Mol Struct, 1131 (2017) 51.
- Bellamy L J, Third Ed., Chapman and Halls, London, (1975).
- Hiremath C S & Sundius T, Spectrochim Acta A, 74 (2009) 1260.
- Silverstein R M, Webster F X & Kiemle D, Spectrometric identification of organic compounds, 2nd edn, (John-Wiley & Sons Inc. ), 2005.
- Almutairi M S, Alanazi A M, Al-Abdullah E S, El-Emam A A, Pathak S K, Srivastava R, Prasad O & Sinha L, Spectrochim Acta A Mol Biomol Spectrosc, 140 (2015) 1.
- Fliszar S, Charge Distributions and Chemical Effects, (Springer, New York), 1983.
- Sponer J & Hobza P, Int J Quantum Chem, 57 (1996) 959.
- Murry J S & Sen K, Molecular Electrostatic Potential Concepts and Applications, (Elsevier, Amesterdam), 1996.
- Shoba D, Periandy S, Boomadevi S & Fereduni E, Spectrochim Acta A, 118 (2014) 438.
- Edwin B, Amalanathan M & Hubert Joe I, Spectrochim Acta A, 96 (2012) 10.
- Singh R N, Tiwari Kumar A, Rawat P, Baboo V & Divya Verma R K, Spectrochim Acta A, 92 (2012) 295.
- Raveendran P R, Menon V V, Shyma M Y, Armakovic S, Armakovic S J & Panicker C Y, J Mol Struct, 1130 (2017) 208.
- Morell C, Grand A & Toro-Labbe A, J Phys Chem A, 109 (2005) 205.
- Aruldas D, Hubert Joe I, Roy S D D & Balachandran S, Spectrochim Acta A, 108 (2013) 89.
- Johnson E R, Keinan S, Mori-Sanchez P, Contreras-Garcia J, Cohen A J & Yang W, J Am Chem Soc, 132 (2010) 6498.
- Humphray W, Dalke A & Schulten K, J Mol Graph, 14 (1996) 33.
- Silvi B & Savin A, Nature, 371 (1994) 683.
- Jacobsen H, Can J Chem, 86 (2008) 695.
- Becke A D & Edgecombe K E, J Chem Phys, 92 (1990) 5397.
- Poater J, Duran M, Sola M & Silvi B, Chem Rev, 105 (2005) 3911. 38 RCSB protein data bank (http://www.rcsb.org/pdb/ home/home.do)
- Viji A, Revathi B, Balachandran V, Babiyana S, Narayana B & Salian Vinutha V, Chem Data Collect, 30 (2020) 100585.

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